PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53239.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family RAV
Protein Properties Length: 336aa    MW: 38020.7 Da    PI: 5.2176
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.11.2e-094794255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +ykGV     +g W A+I+       +  r++lg+f ++  Aa+a++ a+ kl+ 
  PKA53239.1 47 RYKGVVLQQ-NGHWGAQIYT------QhSRIWLGTFKSERAAARAYDSAAIKLRR 94
                69***9877.8******999......44**********99************985 PP
2B383.32.3e-26167255185
                 EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                 f+k+ltpsdv+k++rlv+pkk+a+++    +++  e+  l ++d+ +++W ++++y+k+s++yv+tkGW++Fvk++gL+++D+v F++ 
  PKA53239.1 167 FLKELTPSDVGKLNRLVIPKKHATRFlppvSSDAVEELLLEFRDRVNQTWVFRYCYWKSSQSYVFTKGWNKFVKEKGLRAKDTVGFYRC 255
                 89****************************666667789***********************************************943 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MYGPPEPDKE PLHRLPSAEG DDLSCNLSVG TTTAAPPPPP PPTSSARYKG VVLQQNGHWG  60
AQIYTQHSRI WLGTFKSERA AARAYDSAAI KLRRSDTHRN FPWTEITVHE PGFQELFTTE  120
ALLEMIKDGS YEPKFAEFVR SFQSPNSGIA ANSAAGDGSD VVCREMFLKE LTPSDVGKLN  180
RLVIPKKHAT RFLPPVSSDA VEELLLEFRD RVNQTWVFRY CYWKSSQSYV FTKGWNKFVK  240
EKGLRAKDTV GFYRCEERIG PRRSYCMIDV ILRGGGSSGR RSLAEDAEDI EMGYSGDDDE  300
EEVMSEPAVE VDEEEEKRKL KLFGVYIDID QEMRKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51120.15e-81RAV family protein