PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53257.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family B3
Protein Properties Length: 146aa    MW: 16692.3 Da    PI: 8.3302
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.62.5e-14601302898
                 --..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-..SS.SEE..EEEEE- CS
          B3  28 gkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld..gr.sefelvvkvfr 98 
                 +++ +   l++   +g++W v++  + +++  +l++GW++F  +n++k+gD +vF+l+  g+ ++++++v++++
  PKA53257.1  60 YVPSS-SALIILCCRGKEWAVTC--SVYKKFALLSRGWRKFLADNNMKAGDGCVFELMnsGEmEQKKFRVQILD 130
                 34433.367777789********..99**9**************************875566777778888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MAVQWPLWPF KNETEEGRVD GRGVHLIRRP KVVYLLSSSE APSMADFFFF EFIPSNFRQY  60
VPSSSALIIL CCRGKEWAVT CSVYKKFALL SRGWRKFLAD NNMKAGDGCV FELMNSGEME  120
QKKFRVQILD GQLPQHGSAD HPVLID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.13e-09B3 family protein