PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53339.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family Nin-like
Protein Properties Length: 212aa    MW: 23862.5 Da    PI: 4.6187
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53339.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK81.68e-26135184352
      RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                  ei +e++++yF++pi+ AA +++v+lTvLK++CR +GI+RWPhRk+ksl
  PKA53339.1 135 GEIGMEEIRAYFDMPITRAATKMNVGLTVLKKRCRDLGISRWPHRKMKSL 184
                 5899********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MEVDADQNSI FWHLFDEASA IDGGLMAFPD FLEEEGDYPL GCTDAAVPTF SSGSDELLPL  60
PDCLDYKAIP LSCLPQPPPE LRGMGNCSPE LEWDYVQCLA GPCTPQPELL MEYDHPGECR  120
LLESLPAKRR RSRSGEIGME EIRAYFDMPI TRAATKMNVG LTVLKKRCRD LGISRWPHRK  180
MKSLNTLIQN IQVFNFHARI LYVLSLSLSL LL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.18e-23Nin-like family protein