PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53405.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GATA
Protein Properties Length: 305aa    MW: 32463.2 Da    PI: 5.2761
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53405.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11.1e-17212245134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C++C   kTp+WR gp g+ktLCnaCG++y++ +
  PKA53405.1 212 CAHCEIQKTPQWRAGPMGPKTLCNACGVRYKSGR 245
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MATKAYLEGS GTEKACDDLF ESIDDLLDFS GDDSELPTED ACKDEGTPSP IPAPVMVSAG  60
IGGAGDHLSY PEDDDPEIAN LEWLSNFFED PEISFDFSFR SSSHVSVLIS GAGVAGGGSG  120
SDAYSSSSSS SCSSYSSGSG SVLIVPARAR TKRPRPLSFS SRSFLPPPDS ESVGESSPAR  180
KMKMKRKKKE TAAVVGVEEI PTSATSASVR KCAHCEIQKT PQWRAGPMGP KTLCNACGVR  240
YKSGRLFPEY RPAASPTFVP AIHSNSHKKV VEMRLRSREA AADDGGEKAV AARSCELMEY  300
IRRGE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152156KRPRP
2180190RKMKMKRKKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.11e-39GATA family protein