PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53416.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family E2F/DP
Protein Properties Length: 249aa    MW: 28007.4 Da    PI: 10.1195
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53416.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP71.87.9e-23147211170
     E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwk 70 
                 r+++sL llt+kfl+ll ++++g+++ln++a+ L   dv  ++RR YDi+NVLe+++liek+ kn ir k
  PKA53416.1 147 RYDSSLSLLTKKFLSLLLEARDGTLDLNKAAHVL---DV--QKRRMYDITNVLEGIGLIEKSLKNMIRLK 211
                 6899******************************...**..************************99975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MSGVEGSSLA QRHLPLRPPE ILPRPPNPYF RFGPGEFPGF QCLFSGVSEK GKAPVQSLAP  60
FGRAFPLKND FIRKDDFGAS EAKSCKILVK EEQEDEKGQH ILQPASQKVL KKRRKQITTR  120
HKACEPREPE SADAAASNGL LGASSCRYDS SLSLLTKKFL SLLLEARDGT LDLNKAAHVL  180
DVQKRRMYDI TNVLEGIGLI EKSLKNMIRL KDTHMSKPKE VDGYKARLKA EVKTLHEEEK  240
RLDRLIRYV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111115KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G47870.12e-26E2F/DP family protein