PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53492.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 235aa    MW: 25788.6 Da    PI: 7.8147
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53492.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS149.14.3e-462217160373
        GRAS 160 etgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nse.....s 252
                 etg+rLa+fA+++g+pf+f     ++ e +++ + ++ +gE+++ n+vl+  +l ++s+++     ++L     l +++v+vve+e+   ++e     +
  PKA53492.1   2 ETGRRLASFAASVGLPFSFGQCRLDAGELFRPVAVKIVKGEVVVLNCVLHASHLGNRSAASVA---SFLGSAAALGARLVTVVEEESAGaGEEeegegE 97 
                 79*******************9999******************************88888777...9*******************654233345555* PP

        GRAS 253 FlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrv 351
                 F++ f+e l  ysa+ d+lea++p++ ++r  vEr +lg+ i+ +v  + ++ re +   + W+e+l+e+GF+ v ls ++ +qa+lll  ++ +gy+v
  PKA53492.1  98 FVRLFMEELLRYSAMWDALEAGFPKQRKAREAVERLILGPMITRAVGRAYRR-REHEGLWNGWSEWLSEVGFRRVGLSFFNLCQARLLLGLFN-NGYHV 194
                 ***********************************************99985.777777899*******************************.9**** PP

        GRAS 352 eee.sgslvlgWkdrpLvsvSaW 373
                 +e+ ++ lvl+Wk+ +L+s+S+W
  PKA53492.1 195 DEDsRNKLVLCWKSCRLLSASSW 217
                 *87478999************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
METGRRLASF AASVGLPFSF GQCRLDAGEL FRPVAVKIVK GEVVVLNCVL HASHLGNRSA  60
ASVASFLGSA AALGARLVTV VEEESAGAGE EEEGEGEFVR LFMEELLRYS AMWDALEAGF  120
PKQRKAREAV ERLILGPMIT RAVGRAYRRR EHEGLWNGWS EWLSEVGFRR VGLSFFNLCQ  180
ARLLLGLFNN GYHVDEDSRN KLVLCWKSCR LLSASSWASP PPAISPLPAA SCFNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.12e-32GRAS family protein