PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53496.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 185aa    MW: 19833.2 Da    PI: 7.5111
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53496.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.55.8e-172473255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                +ykGVr ++ +g+Wv+eIr p     r  +r++lg++ ++e Aa+a++aa ++l+g
  PKA53496.1 24 QYKGVRMRS-WGSWVSEIRAP-----RhkTRIWLGSYSSPEAAARAYDAAVLCLKG 73
                69****998.**********8.....336************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MVKRHSISPS GAGAAAVSGQ QRQQYKGVRM RSWGSWVSEI RAPRHKTRIW LGSYSSPEAA  60
ARAYDAAVLC LKGSSAALNF PDSSLVRPPA AALLSPKSIQ RLAAAAAAAA TPSNTSDHTS  120
AAVSSSLSSE VTETAAVLEE WVEFGAFQSP KFFVDSAMNP FSFFAPTQLA EEFEETEDLR  180
LWSFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.12e-33ERF family protein