PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53535.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 232aa    MW: 25743.5 Da    PI: 7.3507
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53535.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.22.2e-1173120454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++  rE+ RRdr+N++f eL ++l +    +++K++K++iL  A++ + +L
  PKA53535.1  73 SKACREKMRRDRLNDKFLELGSILEPG---KAPKMDKVAILCDATRMVTQL 120
                 6789**********************9...9**************999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MGSPGNPNWL LDCSLIDDLS VPTANGFIWA PQGISASYDG SVGIDGSLVE TEAFKDQESR  60
KRARPESSSQ PASKACREKM RRDRLNDKFL ELGSILEPGK APKMDKVAIL CDATRMVTQL  120
RAEAQKLKEA NESLQEKIKE LKAEKNELRD EKQRLKADKE SLEQQLKFLH ARPSFIPHPP  180
LIPTAFAAAQ GKIPGQKMMM PVIGYPGFPM WQLMQPSDVD TSQDAESRPP VA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.16e-96bHLH family protein