PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53885.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 350aa    MW: 38482.6 Da    PI: 5.1484
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53885.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.42.9e-09168215455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR+ri +++  L+ l+P +    +k   Ka +L + ++Y++sLq
  PKA53885.1 168 SHSLAERVRRERISERMKYLQGLVPGC----DKITGKAGMLDEIINYVQSLQ 215
                 8*************************9....899*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MQELLQSLNA PWSSADPSVL ERQRDRVQWQ QSFPPMGESN SFIFDNLLSL PSFMQSLQSD  60
EYPNLHFAEG WPSFDGADAV AVCSVPPKKD IKQGKEGSTK KRKAEKPPTV GSDEAQKAKK  120
VKGAGEAESL MTAEKEKGSP ECSKDNAALP AKQDFIHVRA RRGQATDSHS LAERVRRERI  180
SERMKYLQGL VPGCDKITGK AGMLDEIINY VQSLQRQVEF LSMKLAAVNP LIDFNTDSFF  240
PEEAMNLADV SAVGLSPQLL EAAYSLQLNP IHQMPGCAGP DMDPTAPGLA IRRITVPDMF  300
LDPSYNEFQE SMLPLQSMQG FMWSRGGVGQ GKSKCGSIDA PPPFLDKESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.13e-51bHLH family protein