PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53916.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NF-YC
Protein Properties Length: 112aa    MW: 12158.3 Da    PI: 9.9353
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53916.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC112.52.3e-3518981998
       NF-YC 19 helPlarikkilkad.edvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
                h+lPl+rikki+k+  edvkmis+eaP ++skacelfi elt+r++  + + krrt++k diaaa+t td+fdflv++v  
  PKA53916.1 18 HSLPLSRIKKIMKSSgEDVKMISCEAPLVFSKACELFIQELTVRAYKVTVQGKRRTVQKDDIAAAITATDVFDFLVEMVSA 98
                99***********7549************************************************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
MRQAGIYSGI VPGKAGPHSL PLSRIKKIMK SSGEDVKMIS CEAPLVFSKA CELFIQELTV  60
RAYKVTVQGK RRTVQKDDIA AAITATDVFD FLVEMVSATA AKERACGVLL KQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.12e-29NF-YC family protein