PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53945.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family Dof
Protein Properties Length: 265aa    MW: 28214.5 Da    PI: 6.4995
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53945.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.43.2e-383388661
      zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                 +cprCds+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rkn++ 
  PKA53945.1 33 PNCPRCDSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRG 88
                58***************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MMFSPEDHHL LGYGPRPVAV DHRRWKPNVE LAPNCPRCDS SNTKFCYYNN YSLTQPRYFC  60
KGCRRYWTKG GSLRNVPVGG GCRKNRRGKS ARLPCDPTTS SSRTGNGPAA PESGLRPDLA  120
LDDMFVSRPR PPASSVGSTI DMAVLYARYL NQGPEAPAEA GGSFGPVGLG GAAVSDSFGA  180
MGELGVAVKS GTLPEMSGEE VLDSAGDELS VSFPACPNWP WPSAAEQHLG GFPPAAAAEV  240
GTSHHYQDVL IGDWGSMDQA GFEAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.13e-40Dof family protein