PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53965.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GATA
Protein Properties Length: 126aa    MW: 14198.2 Da    PI: 10.0836
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53965.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.85.4e-1771105135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C+ Cg t TplWR+gp g+kt CnaCG+++rk+++
  PKA53965.1  71 CQLCGETVTPLWRNGPHGPKTACNACGIRFRKEEK 105
                 999*****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MEYRSKFTLS FRTDSFSSSL LLSTSLSPAS SNDGMLAERD LLQRFIDSNY ENSGIDVNLR  60
LSPPRIPVKR CQLCGETVTP LWRNGPHGPK TACNACGIRF RKEEKKLDTS LTLAPPCSIR  120
SRRNKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36620.12e-15GATA family protein