PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53969.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family B3
Protein Properties Length: 146aa    MW: 16720.2 Da    PI: 6.1078
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53969.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.79.2e-1834127199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 f +++ +s v   ++lv+p++f+++  ++++      + + +g++W++++  ++  +r++   GWk+Fv++n+L+ gD ++F+l++++e +++v++++ 
  PKA53969.1  34 FTTIMAKSQVEPPHQLVIPNSFLKDKPLPHAI--LPAIVTCRGKTWDMTYHGNRPLRRFY---GWKKFVEENDLRIGDGCIFELVDDKELKFKVQILDG 127
                 7889999****************999988665..5677799*********6677777776...**********************99********9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MEHSLSTQES DNNVRNTEEP SVNEIIPLLG IPYFTTIMAK SQVEPPHQLV IPNSFLKDKP  60
LPHAILPAIV TCRGKTWDMT YHGNRPLRRF YGWKKFVEEN DLRIGDGCIF ELVDDKELKF  120
KVQILDGQLP EMFSKLGSAQ KPINID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.14e-07B3 family protein