PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA54120.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 293aa MW: 33013.5 Da PI: 8.7106

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA54120.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.9	6.7e-56	7	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhP+deel+++yL++kv + +++ ++i+evd++k+ePwdLp k++ +e+ewyfFs +d+ky+tg r+nrat++gyWk+tgkdke+++ ++ l PKA54120.1 7 LPPGFRFHPSDEELITYYLTRKVINIGFTA-KAIAEVDLNKCEPWDLPGKASMGENEWYFFSLKDRKYPTGMRTNRATNAGYWKTTGKDKEIFHCGHVL 104 79***********************999.88***********9889999***********************************99999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfykgrapkgekt+Wvmheyrl PKA54120.1 105 VGMKKTLVFYKGRAPKGEKTNWVMHEYRL 133 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MDQEAGLPPG FRFHPSDEEL ITYYLTRKVI NIGFTAKAIA EVDLNKCEPW DLPGKASMGE 60 NEWYFFSLKD RKYPTGMRTN RATNAGYWKT TGKDKEIFHC GHVLVGMKKT LVFYKGRAPK 120 GEKTNWVMHE YRLHSQFPYK PSKEEWVVCR VFKKISTNIP IRKLHPSSPS MSPAMLGSPA 180 AAASLSELGE IDVSMLSSSD NPTQVNDGNK VDLSLYMNWL YGRSEAAAGQ PLPPWPSSLL 240 SSKTLQIMSN YQPLDVVNAG SSMNSNIVGE GNIVFPDHNH EQHQQQHSIW RGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18400.1	4e-91	NAC family protein