PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA54240.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family M-type_MADS
Protein Properties Length: 67aa    MW: 7992.44 Da    PI: 10.6627
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA54240.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF24.43.7e-08933125
                S---SHHHHHHHHHHHHHHHHHHHH CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAe 25
                k+ en+s rqvt+skR   ilKKA+
  PKA54240.1  9 KKLENTSGRQVTYSKRSLRILKKAK 33
                5679********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 67 aa     Download sequence    
MGRVKLKIKK LENTSGRQVT YSKRSLRILK KAKDYRHCAT LTFFYSCSHQ QKERPTFCLG  60
ECRFVYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18750.14e-11M-type_MADS family protein