PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA54286.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 171aa    MW: 18893.6 Da    PI: 9.3899
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA54286.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.0006378100123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C++C k F++   L  H++ H
  PKA54286.1  78 YQCSICLKGFPTGQALGGHMSHH 100
                 9*******************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MISLLIRVPS PVGSSDESSN LLVEKGSKRK RSEHKCSLCG DAFPSHERYL GGHKTSHRNA  60
LSKSATDAST ATESRRIYQC SICLKGFPTG QALGGHMSHH CDFTEASCIA RSSTMPVTSL  120
LSSTEFELNI PPAPETRLET VGRCGLLEKE DRVLKALPYK KRFSIKFWSR H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-16C2H2 family protein