PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA54288.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 178aa    MW: 19270.1 Da    PI: 9.0038
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA54288.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.000657899122
                EEETTTTEEESSHHHHHHHHHH CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirt 22
                y+C++C k F++   L  H++ 
  PKA54288.1 78 YQCSICLKEFPTGQALGGHMSQ 99
                9************999999975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MISLLIRVPS PVGSSDESSN LLVEKGSKRK RSEHKCSLCG DAFPSHERYP GGHKMSHRKA  60
LSKSSAGAST ATGSRRIYQC SICLKEFPTG QALGGHMSQS CDFVEASCIA GSSTMPTTSL  120
LSSTEFELNI PPAPETPLES VGRCGLLEKE DRVLKALPYK KRFSIKFCVK ALSCRQND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-10C2H2 family protein