PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA54289.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 240aa    MW: 25284.5 Da    PI: 10.4997
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA54289.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.0001987109123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 +kC+ Cgk+F+++  L  H  +H
  PKA54289.1  87 HKCSVCGKVFPSHQALGGHKTSH 109
                 79************999998877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MAVENSTSPA SRLPWPSPAS STTSSVESSG LQRERRAKRK RSELHPHNHP SEDHKAALSL  60
LLLAGGSATA GYVLLPSLPA LPADLEHKCS VCGKVFPSHQ ALGGHKTSHG RKARATSTET  120
DDRLSDGSAV AGTGRVHRCS ICLKAYPTGQ ALGGHKRRHY EGIIGGASRA AGSSTPPVTS  180
VAYRGFDLNL PPPPEITFKI GGRCGSLEED GGFLTALPFK KRFSVTPPPA RSASDGQRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04340.13e-25C2H2 family protein