PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA54314.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family Dof
Protein Properties Length: 363aa    MW: 37517.2 Da    PI: 8.4794
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA54314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.28.9e-3979138261
      zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                 ++++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rk k s
  PKA54314.1  79 QQQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKAKPS 138
                 68999***************************************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MIQELLAGAL EERKIVISFP AGGISAEHSS LNSMLCSAAG ISTPPSSSSS PVQLTASSSS  60
SSSSTTTTTE PQLPQQQQQQ QNLRCPRCDS SNTKFCYYNN YNLTQPRHFC KTCRRYWTKG  120
GALRNVPIGG GCRKAKPSAT TSCGSAATGK PIGGGIKAKP IASVDPIFRA GTEHELMLAA  180
AAAAPPTSHL LALLRASSGG SCGGLQNPNS IRLKEEGGQL GIPMATGGAA ASLSLDPLAM  240
GSLWKISEVP IPYPQQPYQL QQRNASFSDV AAPATSSGGM QELYQSLRSP AVTNFWNDQM  300
TRNNGYWSVP VCPSMAAAMS TGGGVGGGSS AAALETSGVG SVGGGEFGCW NPALSWSDMS  360
TIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60850.15e-32Dof family protein