PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA54318.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family Dof
Protein Properties Length: 191aa    MW: 20924.8 Da    PI: 7.3104
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA54318.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof105.92.3e-333693461
      zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                +  +cprC s +tkfCyynny +sqPr+fC++Crr+Wt GG++rnvP+Gg++rk++++
  PKA54318.1 36 NRERCPRCSSLDTKFCYYNNYRTSQPRHFCRSCRRHWTLGGSIRNVPIGGASRKRHRA 93
                5679**************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MKSMEAASTG LRKPGIRPYT PLAPAALAAV EAAEPNRERC PRCSSLDTKF CYYNNYRTSQ  60
PRHFCRSCRR HWTLGGSIRN VPIGGASRKR HRANPYPKPA AVTDQHPPPS FLLVDAPPVA  120
ATEAPLPSAC FGLSDSPPLD GMFDVGLAQL EWPPEILALE MFGSFEKTCW TTESCFDDGD  180
LYNVPVVDAS L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G45610.13e-28Dof family protein