PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA54394.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 332aa    MW: 36710.4 Da    PI: 8.556
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA54394.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM156.79.8e-49121392128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                 ppGfrFhPtd+el+ +yL kk++++  ++  +i+++d+yk++Pw+Lp k+  ++ ew+fFs+rd+ky++g r+nra++sgyWkatg+dk++l+  + + 
  PKA54394.1  12 PPGFRFHPTDQELIIHYLWKKATTSLPSEWAIIADIDLYKFDPWELPVKAFFGQGEWFFFSPRDRKYPNGVRPNRAAASGYWKATGTDKPILAGgGAQC 110
                 9********************99999888899***************76667889**************************************845556 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 +g+kk L+fykgr pkg+ktdWvm+eyrl
  PKA54394.1 111 IGVKKALIFYKGRPPKGTKTDWVMQEYRL 139
                 ***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MEAGRLLSSQ FPPGFRFHPT DQELIIHYLW KKATTSLPSE WAIIADIDLY KFDPWELPVK  60
AFFGQGEWFF FSPRDRKYPN GVRPNRAAAS GYWKATGTDK PILAGGGAQC IGVKKALIFY  120
KGRPPKGTKT DWVMQEYRLL DYMAPSRSQK QRGSMRLDDW VLCRVKQKGF CPAAGDDVDT  180
VKGGHQDQKI ILQIKDSNKE RNSSGEFSDH MGYLLECPQE QGGESSGEDS SPGGAAGFMW  240
PPPTSSSSIN NGVGGSYGTN AARNNDQAVA VPQTPQLVAS ALSKRKQSTF CVVDELMLMQ  300
MQQPGNKRPQ CPADHGRFSS FGDNGGFSEF FI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.21e-76NAC family protein