PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA54511.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 428aa MW: 47914.4 Da PI: 5.0056

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA54511.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	103.2	3.3e-32	58	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sgyWkat 86 lp G++F+P+d+e++ +L +k+ + ++++ +++ +i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ + +W++t PKA54511.1 58 LPSGVKFDPSDQEML-LHLMAKLGKAGvqphpfINEFILtVEDDnGICYTHPQKLP-GVKNDGTVAHFFHRTFKAYNTGTRKRRKIRtdehaDVRWHKT 154 699**********.567777666664565553333332444436******.778888999**************85444555899 PP NAM 87 gkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 gk+k+vl +ge+vg+kk++v+y + k+ekt+Wvmh+y+l PKA54511.1 155 GKTKPVLL-DGEHVGCKKIMVLYvsAPKGGKAEKTNWVMHQYHL 197 ****.999*******4423555667*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MTGPSWLVDS KRIAKKIKSA SERGDPKTIK WISNPTKACP KCSYIINNDD VVQEWPGLPS 60 GVKFDPSDQE MLLHLMAKLG KAGVQPHPFI NEFILTVEDD NGICYTHPQK LPGVKNDGTV 120 AHFFHRTFKA YNTGTRKRRK IRTDEHADVR WHKTGKTKPV LLDGEHVGCK KIMVLYVSAP 180 KGGKAEKTNW VMHQYHLGTG EDEVDGEYVV SKIFHQQQLK PCERNREDPN IVAAETVGAE 240 TIIVACSGSA TPDNEPENQH LMHSPEEIYD QVKLEHELIN NSNACEDVSE KFLDGSVVTG 300 NGNENLDDQD AIAHDNHQTE DSKWWEGESQ FLLDSQQLAE GIAICDEFLQ SQSSCAGEEE 360 HHSKPSLSDY ARMGVEDLKR DLEECQILRN SDNKSNGDLD TPSDMRLSQL EFGSQDSFMA 420 WAGSKLAD

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MTGPSWLVDS KRIAKKIKSA SERGDPKTIK WISNPTKACP KCSYIINNDD VVQEWPGLPS  60
GVKFDPSDQE MLLHLMAKLG KAGVQPHPFI NEFILTVEDD NGICYTHPQK LPGVKNDGTV  120
AHFFHRTFKA YNTGTRKRRK IRTDEHADVR WHKTGKTKPV LLDGEHVGCK KIMVLYVSAP  180
KGGKAEKTNW VMHQYHLGTG EDEVDGEYVV SKIFHQQQLK PCERNREDPN IVAAETVGAE  240
TIIVACSGSA TPDNEPENQH LMHSPEEIYD QVKLEHELIN NSNACEDVSE KFLDGSVVTG  300
NGNENLDDQD AIAHDNHQTE DSKWWEGESQ FLLDSQQLAE GIAICDEFLQ SQSSCAGEEE  360
HHSKPSLSDY ARMGVEDLKR DLEECQILRN SDNKSNGDLD TPSDMRLSQL EFGSQDSFMA  420
WAGSKLAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-133	NAC family protein