PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA54534.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 204aa    MW: 22771.7 Da    PI: 8.0924
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA54534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM110.81.5e-34111281128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrF P+deelv ++L++k++  + + + +i+++d+++++PwdL++k+ ++ + wyfF++r k+        r+t +gyW+++g   + ++    +
  PKA54534.1  11 LPPGFRFFPSDEELVRHFLRRKTAMLPGQPDVIIPTLDLCRFDPWDLHRKALQGGNYWYFFAHRTKN------IIRSTPNGYWSNSGIADKAVT----D 99 
                 79*************************888667**************977778899*******9885......5799**********9666665....6 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 vg++  L+f++g apkg+kt+Wvmheyrl
  PKA54534.1 100 VGTRSALAFFSGIAPKGRKTNWVMHEYRL 128
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MGEEGGSSST LPPGFRFFPS DEELVRHFLR RKTAMLPGQP DVIIPTLDLC RFDPWDLHRK  60
ALQGGNYWYF FAHRTKNIIR STPNGYWSNS GIADKAVTDV GTRSALAFFS GIAPKGRKTN  120
WVMHEYRLAK RLVISSSSSA SGRKPSSKKS HGRADAGKWV VCRVFEAGCG SQEGGHDEDA  180
MELSTMDEMF LSFEDYEEVS LPVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.15e-51NAC family protein