PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA55027.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TCP

Protein Properties

Length: 183aa MW: 19027.7 Da PI: 10.2168

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA55027.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	81.9	1.6e-25	1	60	24	83
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssas 83 +++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as+++ ++s s s PKA55027.1 1 MPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSQSLRSPS 60 9**********************************************8883333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MPIICAARVF QLTRELGHKS DGQTIEWLLR QAEPSIIAAT GTGTTPASFS TVSQSLRSPS 60 AAAVSTFPGS HLLPHTLAPA PFILGKRLRS DGTSAMAQPM GTAASFWAVP ARPDFGQVWS 120 FATPEIIMPP AGISGRFTQP VGEASAARVG NYLPIAQGHL NLLASLSGAA AAAAAGRREE 180 EPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	1e-43	TCP family protein