PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA55134.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 249aa    MW: 27182.7 Da    PI: 6.7756
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA55134.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-10161207455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + +++ ++RR+ri +++  L+el+P+      kK++ +++LekA+ Y+k Lq
  PKA55134.1 161 SQSIAAKNRRERITERLKVLQELVPNG-----KKVDLVTMLEKAISYVKFLQ 207
                 567888*******************98.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MALGSSKAAV FQGFDPSFLM IEDGGGCSEN LFMNSIFCGA EAPSPAIDFE AAGEVHGGGS  60
GYPSSAMLSF EQRLDLWDDY SMSCVDAMEA EYYQMSQFNL QNGSSGSNSR VRDVAQAGHE  120
RGLQKRPLMG SELQLKKKHC GNAYNKKQAK AKSTTATSKD SQSIAAKNRR ERITERLKVL  180
QELVPNGKKV DLVTMLEKAI SYVKFLQLQV KVLAADEFWP AQGEKAPEIS QVKEAIDAIL  240
SSQRGNYSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.18e-47bHLH family protein