PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA55157.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 220aa    MW: 24188.1 Da    PI: 8.8323
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA55157.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2507.3e-1679130256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 ++kGVr+++ +grW+AeIr p++   + r +lg+f t+ eA +a+ aa+++l +e
  PKA55157.1  79 KHKGVRRRRPSGRWAAEIRRPVS---NERLWLGTFPTESEAVEAYRAAARRLQNE 130
                 89******************765...3**********88************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MGRPKLRAAK VWPLKKTKSR IFRIVYDDPD ATESSGDERG GVSRRKRTVQ EFLFSACSAK  60
IVPSASTRSS TSPSGKRNKH KGVRRRRPSG RWAAEIRRPV SNERLWLGTF PTESEAVEAY  120
RAAARRLQNE KEACGSAGSA AEGFLSASLP PLDELDPPLF TGEDDCRTGG LETVGLQDAL  180
GIGFDSYFLW GELSAEFWPG SAYVANDWAS VAEIEEIFAN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17787RNKHKGVRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46310.13e-09ERF family protein