PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA55267.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 210aa MW: 23761.2 Da PI: 9.9992

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA55267.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	105.1	9e-33	9	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatgkdkevlsk.k 96 lppGfrF+Ptdee++ +yL++k+ +++l++ +i+e+ d+ k++P+dL + e yfF r+ ++++ + n +t+ gyWka gk+k v+s+ + PKA55267.1 9 LPPGFRFRPTDEEILIQYLRRKAFSSPLPA-AIISELdDLRKYHPHDLTGGF---GGERYFFNLREANERRRSTINLSTScLGYWKAVGKEKMVVSSsR 103 79**************************.78999989*****8443...4589***9999988888855549********99878 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 +el g+ + Lvf+ g++ +g +t+W+mheyrl PKA55267.1 104 RELLGMVQALVFHGGKDFNGFHTEWFMHEYRL 135 888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MKPSMEIKLP PGFRFRPTDE EILIQYLRRK AFSSPLPAAI ISELDDLRKY HPHDLTGGFG 60 GERYFFNLRE ANERRRSTIN LSTSCLGYWK AVGKEKMVVS SSRRELLGMV QALVFHGGKD 120 FNGFHTEWFM HEYRLATNGD KLVASGKEWI VCRIFAKRRG LKKKKKAKEI QTSPSSSGSS 180 SCISCLSYEE ESQNGEEAMS KLAASSAPQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-44	NAC family protein