PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA55715.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family B3
Protein Properties Length: 159aa    MW: 18487.4 Da    PI: 9.6432
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA55715.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.55.7e-14641401698
                 EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 lv+p +f +     + ++++ +l   ++++W v + +rk+    vl +GW++F+ +n+L+ gD +vF+l++ ++  ++v++++
  PKA55715.1  64 LVIPANFHQFL---PSCNTKAIL-WHQSKEWVVDYVIRKT--YKVLNGGWRKFATDNNLRLGDACVFELMDAEKVMFRVQILD 140
                 78888885322...345555554.4589*******55444..578************************99899989999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MIGVRRSKRL LKQSQDGCLS QESTQRVSVE AGASFSQAEI FPLQGKPYFT YIIWKYQINK  60
PFYLVIPANF HQFLPSCNTK AILWHQSKEW VVDYVIRKTY KVLNGGWRKF ATDNNLRLGD  120
ACVFELMDAE KVMFRVQILD GQLPERREGV RAEIPILID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09780.12e-07B3 family protein