PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA55716.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family B3
Protein Properties Length: 165aa    MW: 18605.4 Da    PI: 7.8463
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA55716.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.81.9e-13821463398
                 -SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  33 sktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 s  +++   ++++W v++++  +++++  + +GW++F  +n+L+ gD +vF+l++ +e +++v++++
  PKA55716.1  82 SPSVVVLCYQNQEWAVNFNVyANNRKA--FVGGWRQFSVDNNLRIGDACVFELIDAKELRMRVQILN 146
                 33688888899*******663555544..557**********************99*******9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MIIFQVRKSA RLLKQNLSRQ DNCLSPKSTQ CINADPDASF SQAEILPLEG KPYFSLIIGR  60
SQLDKPYCVI VPDSIHNFLP ESPSVVVLCY QNQEWAVNFN VYANNRKAFV GGWRQFSVDN  120
NLRIGDACVF ELIDAKELRM RVQILNGQVP ARSHVGNADI PIIID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.14e-09B3 family protein