PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA55748.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family WRKY
Protein Properties Length: 338aa    MW: 36858.1 Da    PI: 7.7391
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA55748.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.59e-31199257259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY+++Hnh+
  PKA55748.1 199 SDLWAWRKYGQKPIKGSPHPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSDHNHP 257
                 699************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MCDYFWQTME KSQGDLTDIF RACGLQSPPT TADFPANLTE GCWQIPPEPA AAYQPPNNSC  60
FGDPFADFQD PLLQDLAGTN FFEVPPEVAT AARGSTGLEK AVDGGGEEAR KPCSSLFSRM  120
LQISPGHIKA SPVVRSPPRV ASDDVKKAGA GSHDGGCLQI PSPRTSGIKK RKSQLKKVVC  180
IPAPAAASSR PGTGEVVPSD LWAWRKYGQK PIKGSPHPRG YYRCSSSKGC SARKQVERSR  240
TDPNMLVITY TSDHNHPWPT HQNALAGSTR SHSSKNPKQA ANSLKEESKE SSSSSFPAVK  300
QEAREITAHE LDQDDDFKKV FQQTFDHSDN FFTDFAEL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163172PRTSGIKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.13e-68WRKY family protein