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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PKA55818.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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| Family | bZIP | ||||||||
| Protein Properties | Length: 143aa MW: 16916.4 Da PI: 10.0518 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 47 | 5.7e-15 | 23 | 81 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
++ +r+++NRe+ArrsR RK+++++ L +v+ L++eN++ ++++ ++++ k++s++
PKA55818.1 23 RKRKRMESNRESARRSRMRKQQRLDDLLHEVARLKNENSQIEMQISMFTQQYLKVESNN 81
5789*************************************************999987 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 143 aa Download sequence |
MSPKPARQFS SSEEDSRPGI DERKRKRMES NRESARRSRM RKQQRLDDLL HEVARLKNEN 60 SQIEMQISMF TQQYLKVESN NSILRTQVME LTDRLRYLNS VLRFIEQLSG MSMEIQEIPD 120 PLLKPWQLPC QTHPIIASAN MLQ |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 36 | 43 | RRSRMRKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G62420.1 | 8e-48 | bZIP family protein | ||||




