PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA55831.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 213aa MW: 23718.1 Da PI: 9.1398

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA55831.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.4	8e-34	30	84	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LHerFv+av+qLGG+ekAtPkti+++m+vkgLtl h+kSHLQkYRl PKA55831.1 30 KPRLRWTADLHERFVDAVAQLGGPEKATPKTIMRTMGVKGLTLFHLKSHLQKYRL 84 79****************************************************8 PP
2	Myb_DNA-binding	71.8	1e-22	32	83	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++vdav+qlGg+ t+ktI+rtmg kg+tl ++ks++qky+ PKA55831.1 32 RLRWTADLHERFVDAVAQLGGPekaTPKTIMRTMGvKGLTLFHLKSHLQKYR 83 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MFSGLIHRHE ASIPQEEIHG PSLVLTADPK PRLRWTADLH ERFVDAVAQL GGPEKATPKT 60 IMRTMGVKGL TLFHLKSHLQ KYRLGKQSGK EMTEQPKDVP GSGSSLSPRL SAPDVNENQE 120 VKEALRAQME VQRRLHEQVE VQKHIQIRME AYHKYIDTLL EKACKIASEQ IASSGFGGQV 180 CPSPNSLSQS VFQQLQVGSI SLADQKSTPH FSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	8e-68	G2-like family protein