PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA56103.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family HSF
Protein Properties Length: 309aa    MW: 33838.9 Da    PI: 8.462
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA56103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.71e-34241162102
                   HHHHHHHHHCTGGGTTTSEESSSS.SEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 Flkklyeiledeelkeliswseng.nsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97 
                   Fl+k+y++++d+++++++sw ++g ++fvv+ + efa+++Lp++Fkh+nf+SFvRQLn+YgF+kv  e+         weF+++ F+kg+k+ll++i
    PKA56103.1  24 FLTKTYQLVDDPSTDHIVSWGDDGaSTFVVWRPPEFARDLLPNFFKHNNFSSFVRQLNTYGFRKVVPER---------WEFANEFFRKGEKHLLCEI 111
                   9********************766599***************************************999.........******************* PP

                   XXXXX CS
  HSF_DNA-bind  98 krkks 102
                   +r+ks
    PKA56103.1 112 HRRKS 116
                   ***97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MADTSWEGGY GDSPKVAAVA PAPFLTKTYQ LVDDPSTDHI VSWGDDGAST FVVWRPPEFA  60
RDLLPNFFKH NNFSSFVRQL NTYGFRKVVP ERWEFANEFF RKGEKHLLCE IHRRKSPSFA  120
GTAASVSPLH PFTLFRQPFD EYTPHLAFPA NRPHWRNPPT APPAAAAAAA LLEENERLRR  180
SNAALMSELG HMRRLYNDII YFLQNHVQPV APSAAAAASY HRRNPGGRNS GGSTTSSSSV  240
TVAEQPRPPA EDADGESAGG PSPKLFGISL GVKRAVDSGM QLPASSPTKL RVVFDVDDLS  300
LGKLPSPSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.15e-70HSF family protein