PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA56128.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ZF-HD
Protein Properties Length: 237aa    MW: 26037.4 Da    PI: 9.7545
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA56128.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer98.45.5e-3150103357
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 
                  + rY+eClkNhA+ +Gg+avDGCgEfm++ ge+g+++al+CaAC CHRnFHR+e 
   PKA56128.1  50 GSRYRECLKNHAVGIGGYAVDGCGEFMAA-GEDGSMDALRCAACSCHRNFHRKEL 103
                  579*************************9.999********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MDFRDHGDSD EEMRIPNFDL APAMGNSVRS KPAGGGLDLA GCSNSKNSTG SRYRECLKNH  60
AVGIGGYAVD GCGEFMAAGE DGSMDALRCA ACSCHRNFHR KELAGGDQLT SPLLPFSPYF  120
RTPVGHLHRR RTPYLALPST SGGERSRGEE EPSSLFGFAG ISGGAVRPSP AMRRKRFRTK  180
FTAEQKSKML AFAEKVGWRI QKHDEPAVRQ FCDEASINRH ALKVWMHNNK HTLGKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-60ZF-HD family protein