PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA56160.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB
Protein Properties Length: 286aa    MW: 32369.2 Da    PI: 6.5839
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA56160.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.69.1e-113077247
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     g+WT+ E +l+ +a + +  g   +W+++a+ ++ g+t ++++s++q++
       PKA56160.1 30 GNWTQLENKLFENALAHFDEGtpdRWEKVAEIIP-GKTVEDVISHYQDL 77
                     89********************************.************86 PP
2Myb_DNA-binding431.1e-13137181347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+ E+++++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
       PKA56160.1 137 PWTEKEHKRFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 181
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MMTNPWTEVF SPAASYFSDS NWVLREKRNG NWTQLENKLF ENALAHFDEG TPDRWEKVAE  60
IIPGKTVEDV ISHYQDLEED VSCIEAGLVP FPVYISSFFT SDVEEDHVCD GLKHGYCIGE  120
KRPGGRLSYQ ERKKGVPWTE KEHKRFLMGL KKYGKGDWRN ISRNFVITRT PTQVASHAQK  180
YFIRLNSASK DKRRASIHDI TTVSLDDNWP LSPSYPSVVT MQSSSATSST SEKFSVVVDS  240
EQIDEVARAV TSGEQFIPSS YGLHLNRNLH HTNLCGCIVG HNGVSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-87MYB_related family protein