PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA56262.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 160aa    MW: 17622 Da    PI: 7.341
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA56262.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.0005354921454
                HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                d+i ++ + L++l+ +   ++    + a++L++A+ YIk L
  PKA56262.1 54 DKIGERVAALQQLVSPF--GKLAQSDTASVLTEATAYIKFL 92
                67778889999999995..4888899*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MTPSVSLPKG SRQQEAEPAA QSPLKCCLSR LISSLLCRFH LVLRFGFFEQ EKKDKIGERV  60
AALQQLVSPF GKLAQSDTAS VLTEATAYIK FLHDQLQVLS APYFHASTGR PQLNNDFDAG  120
RRVLQPEEQG AVSDASGFNG PDCAEQWCRY LGSYIQVASL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.38e-21bHLH family protein