PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA56326.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

DBB

Protein Properties

Length: 251aa MW: 26907.6 Da PI: 5.723

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA56326.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.5	1e-06	4	46	5	41
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ ++ +++ C ++ lC+ C + +H+ H +v+ PKA56326.1 4 QCDVCGIEPAAVLCCADEAALCARCDSDIHSAnklagkHPRVS 46 7*****************************6678888888776 PP
2	zf-B_box	25.2	3.4e-08	55	96	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg.......Ht 38 + C++++e++ +fC +++ lC dC + +H g H+ PKA56326.1 55 LPLCDNCKENRGFIFCMEDRAILCTDCDVPIH-GantqtgkHR 96 689*****************************.5466666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MKIQCDVCGI EPAAVLCCAD EAALCARCDS DIHSANKLAG KHPRVSLLHP SPQPLPLCDN 60 CKENRGFIFC MEDRAILCTD CDVPIHGANT QTGKHRRFLL TGIRISSTAI SSPSSKAAAV 120 EVGDGVDGFV PAGDSEHAGS SISDYLTKML PGWRVDDFLA DDDLPEPGPP PPEATGPEIS 180 CTSWEVAGHH LPICVPLFSP LMSQGEVLLP AMGSVEGSRS RRRESVSMVP EVGQIHHDHS 240 CSKRSRSSLW F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39070.1	1e-37	DBB family protein