PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA56554.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 100aa    MW: 10943.2 Da    PI: 8.2698
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA56554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.79.1e-051840123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C+k++++   L  H+  H
  PKA56554.1 18 HVCSYCNKVYPNLQALGGHQTAH 40
                79**************9999877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MNGDDHPARP PPHGAAWHVC SYCNKVYPNL QALGGHQTAH RKEIEEMRRQ HEARVQESKQ  60
QRRAAAAAAA AAQTADEERS VNLELTLGTG VGGPDLKLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02030.11e-06C2H2 family protein