PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA56603.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 201aa    MW: 21489.1 Da    PI: 9.3696
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA56603.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.6e-192171256
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +++GVr+++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++ a+++l+g+
  PKA56603.1 21 RFRGVRRRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDSAARALRGA 71
                69*******.**********883....5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MAMRKGRSPA AEAQQAGNEA RFRGVRRRPW GRFAAEIRDP WKKTRVWLGT FDSAEDAARA  60
YDSAARALRG AKAKTNFPYP PPHGLPAAGG GGSMPLPFLR GQPPTPLPSR PASSSLSSTV  120
ESFGGPRLST RGPPDIHLRR SSNPAPPMVL TGDQDCHSDC GSSSSVVDDG DIDSACRLPL  180
PFDLNVLPPL DDDLQNTALH L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.11e-10ERF family protein