PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA56664.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

MYB

Protein Properties

Length: 256aa MW: 28664.1 Da PI: 5.8087

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA56664.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.1	1.5e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEde+l+++++ G g+W++ ++ g+ R++k+c++rw +yl PKA56664.1 14 KGRWTAEEDEILARYIAANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	50.9	3.6e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E++++v++ lG++ W++Ia++++ gRt++++k++w+++l PKA56664.1 67 RGNISKDEEKIIVKLQSTLGNR-WSLIAAHLP-GRTDNEIKNYWNSHL 112 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MGRAPCCDKV GLKKGRWTAE EDEILARYIA ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI SKDEEKIIVK LQSTLGNRWS LIAAHLPGRT DNEIKNYWNS HLSRRVHSFR 120 SLGGGGETVI VDLGCGKRWR GRTSRAAMKK NSFAFSAAGD DRTDQDHQKL ASSSCSRTLD 180 FDVLDNFAEV MGPGDEDAAA EERSGEAAAS AAEKGWKAAE WDLEGLEAKL WEEETAEIWP 240 WEVWEDEETL CSWLLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	2e-76	MYB family protein