PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA56843.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 206aa MW: 23095.2 Da PI: 10.0659

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA56843.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.5	2.4e-32	127	185	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s +prsYYrCt+++C+vkk+v+r ++d+++v++tYeg Hnh+ PKA56843.1 127 LDDGYRWRKYGQKAVKNSVHPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGVHNHP 185 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MEHIQGESLP SFPYFPDSIS PSPLPSESLQ ISNQLPLQLQ QESLRGLGTA DLAALLLPTP 60 NGHREVQEMM QVAGGSSLIK ARRGDQGEQR HGGGKENVKG KAAAVGRTKK VNRPRFAFQT 120 RSADDILDDG YRWRKYGQKA VKNSVHPRSY YRCTHHTCNV KKQVQRLSKD TSIVVTTYEG 180 VHNHPCEKLM EALSPLLKQI QFFTQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41570.1	7e-58	WRKY family protein