PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA56875.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 203aa    MW: 22196.8 Da    PI: 9.7615
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA56875.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.55.3e-211867255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae+Aa a+++a+++++g
  PKA56875.1 18 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEGAAIAYDEAALRFKG 67
                69*******.**********94....45***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MKLKYGMQIN EGSEKKQHYR GVRQRPWGKW AAEIRDPKKA ARVWLGTFDT AEGAAIAYDE  60
AALRFKGTKA KLNFPERVQG RTDLGFVVSQ GIPARRPPEQ AAMHGVLQPP AVALDPDLAQ  120
YAQILQSRDE DLQNVASGLY GRGLTFTAGA AGSAPETISF SGYSSPSSYM TSEVMLHFGS  180
SSTSSSSTSW PQRDHRDEGS RNT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.18e-34ERF family protein