PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA56884.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 255aa    MW: 28105.9 Da    PI: 8.2103
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA56884.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH361.3e-11122169455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++ +L+el+P +    +k   Ka iL + ++Y++sLq
  PKA56884.1 122 SHSLAERVRREKISERMKKLQELVPGC----DKIIGKALILDEIINYVQSLQ 169
                 8*************************9....899*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MGTAVFLPDS PMEILLNLHD GQAGSLCSNG DSYSAEAIPG GSSSLTANSF GSRTEQNPLI  60
SSSEKRRSKD MKRGSKNVAS QSKGKSKRDK KSRSTGPKEM EEKKPSTAYI HVRARRGQAT  120
DSHSLAERVR REKISERMKK LQELVPGCDK IIGKALILDE IINYVQSLQN QVEFLSLKLA  180
EVNSILYEYG LGFDDFRRPQ EIDQIGNLQT VLVPSMMESI EMQGPADGFM MQAMASSSFL  240
LLHGEGSTIE FPQVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.22e-46bHLH family protein