PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA56903.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 225aa MW: 25372.9 Da PI: 9.5866

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA56903.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	150.4	8.5e-47	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelv yL++kv + +l++ vi+e+d+ k++Pw + ++e+e yfF+ r ky++g+r+nrat sgyWkatgkdk++++ +++ PKA56903.1 14 LPPGFRFHPTDEELVLLYLRRKVFSYPLPA-AVIPEIDMGKSDPWIIC---GGGEQERYFFHLRTAKYPNGSRSNRATGSGYWKATGKDKPIIVPkGNQ 108 79**************************.89**********5...56889********************************9985777 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk +vfy+gr + g++tdWvmheyrl PKA56903.1 109 VVGMKKLFVFYSGRPSAGSRTDWVMHEYRL 138 8*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MEKQTLEKPG AMKLPPGFRF HPTDEELVLL YLRRKVFSYP LPAAVIPEID MGKSDPWIIC 60 GGGEQERYFF HLRTAKYPNG SRSNRATGSG YWKATGKDKP IIVPKGNQVV GMKKLFVFYS 120 GRPSAGSRTD WVMHEYRLAG AETAGRRDWV LCCVFMKKRA ARMESEAEQQ RIVRFFDFMR 180 ENERDASPSR RLSSPSSSLS LSCVTELSEG NGNGEDCSFS SSSFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-72	NAC family protein