PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA56985.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NF-YA
Protein Properties Length: 325aa    MW: 35499.7 Da    PI: 10.0327
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA56985.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.15.2e-32160216158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 d p+YVNaKQy++I++RR++Rak+e e+k+ +k rkpylheSRh hA+rRpRg++GrF
  PKA56985.1 160 DGPIYVNAKQYHGIIRRRKARAKAEMENKV-IKVRKPYLHESRHLHAMRRPRGCSGRF 216
                 57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MQSMVCFKNN GGSSQISLAQ PSLTPLVPWW VGSQPLYGES LSQFKVLISD QSSGTQPLTA  60
DQSMKSWPAT HEKGDGGDAS LKLSMISEND SGKEQKIQQH SAGISQQFPP NYLGCFQLGL  120
GQPVVCSSYS NINQHYSPFT SYGAQSLHER LLLPLSKSAD GPIYVNAKQY HGIIRRRKAR  180
AKAEMENKVI KVRKPYLHES RHLHAMRRPR GCSGRFLNTK GAGMTSIPNN TNPFAWPARS  240
ASSEVLQSDG GNPNSTSYGS STSGSEVSSL HSRRDTDRLS VTGNLTPSLY HPLTSTFDHG  300
KHSSGNREKW GPTADTGLFA ARWMS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.22e-34NF-YA family protein