PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA57005.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C3H
Protein Properties Length: 167aa    MW: 18835.5 Da    PI: 8.4996
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA57005.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.41.9e-06108129527
                 --SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHgp 27 
                 +C+ ++  G+C+ G++C+F H++
  PKA57005.1 108 ECHMYMM-GFCPNGPSCRFRHSK 129
                 7999999.***********9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MDESDGALSF DFEPALVAGA GGTSAALPQE GQAPTAPAAV AAAPMERRNF RRTVCRHWLR  60
GLCMKGDSCG FLHQYDKHKM PVCRFFRNFG ECREKDCLYK HTLEEIKECH MYMMGFCPNG  120
PSCRFRHSKL PGPPPPAEEV LKRIQHLSSS SYNSFNRQFQ HRNASPI