PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA57072.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NF-YB

Protein Properties

Length: 202aa MW: 21728 Da PI: 6.6754

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA57072.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	184.7	7.4e-58	19	114	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplk+yl+k+re+egek PKA57072.1 19 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKFREMEGEK 114 89*******************************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MADSDNESGG ISNSTTGNRE QDRFLPIANV SRIMKKALPA NAKISKDAKE TVQECVSEFI 60 SFITGEASDK CQREKRKTIN GDDLLWAMTT LGFEEYVEPL KIYLQKFREM EGEKCAGAGG 120 SQSQQKDGGG GGGDGGASSG FSGGVAGMYG GVGGGLMMMG QQMYGSPPSQ SYHHHHHHHH 180 HQQQQGSYIK SKSQSVAHEI ET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	1e-71	NF-YB family protein