PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA57102.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 301aa    MW: 33470.9 Da    PI: 8.5515
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA57102.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.43.4e-5081321128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrFhPtd+elv +yL++k++g ++ +  +i+e+d+y+++Pw+Lp+++  +ekewyfFs+rd+ky++g+r+nra++sgyWkatg dk++ s   + 
  PKA57102.1   8 LPPGFRFHPTDDELVAHYLCRKCAGLPVAA-PIIAELDLYRFDPWQLPAMALYGEKEWYFFSPRDRKYPNGSRPNRAARSGYWKATGADKPLGS--PAP 103
                 79*************************988.88***************7666789*************************************99..789 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 v +kk Lvfy+grap+gekt+W+mheyrl
  PKA57102.1 104 VAIKKALVFYSGRAPRGEKTNWIMHEYRL 132
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MSAGDLQLPP GFRFHPTDDE LVAHYLCRKC AGLPVAAPII AELDLYRFDP WQLPAMALYG  60
EKEWYFFSPR DRKYPNGSRP NRAARSGYWK ATGADKPLGS PAPVAIKKAL VFYSGRAPRG  120
EKTNWIMHEY RLAGVDRSAS RKNSLRLDEW VLCRIYNKKG GGSGDKPRAG NFRLPATPET  180
PEQKPEIFPQ ASEMSSRVTT ASAAAVTPLS KPYTDLLCFD TSESLPRLHA DSSCSDHLLK  240
QEFTCEREVQ SQPRWDDLER ALGVNNANAT AAIGGFSPVG FDGGLLSPWQ QDVMTYLQKP  300
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-112NAC family protein