PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA57169.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

FAR1

Protein Properties

Length: 678aa MW: 78008.9 Da PI: 7.7527

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA57169.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.1	1.8e-20	62	155	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++A ++GFs+r+++++ + + t+r fvC + g++ + ++++k +r+r+++r+gC+a ++++k++ +w+vt + ++HnHel PKA57169.1 62 EFYSQFAMRCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPIKVSTETKPQRNRKSSRCGCQAYMRISKTTdmgLYEWRVTGFANHHNHELL 155 6************9998877356667999*************9******************99655569***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MSEADEELLN VYDEHSEQRS LTLDDTSSTE ESPKHLRLSS EAANDRIPYV GQRFATHDAA 60 YEFYSQFAMR CGFSIRRHRT EGKDGVGKGL TRRYFVCHRA GNTPIKVSTE TKPQRNRKSS 120 RCGCQAYMRI SKTTDMGLYE WRVTGFANHH NHELLDPNQV RFLPAYRTMS DSDKNRILMF 180 SKTGISVQQM MRLMELEKCV EPGYLPFTEK DVRNLIQSFR KVEQDDENIN LLRMCRNLKE 240 KDPNFRYEFT TDVNGRLENI SWSYASSVQS YENFGDAVVF DTTHRLNAFD MPLGIWFGMN 300 NYGMPCFFGC VFLREENIRS FSWALKVFLK FMNGKPPQTI LTDQNACLKE AITVEMPTTK 360 HVFCAWLIAA KFPSWFSAVL GERYNDWNAE FYRLYNLEII EDFEHGWKEM VDSFGLHSNR 420 HISNLFAFRD LWASPYLRSH FLAGMTGTGI SKVINSFIQR FLSAQTRLGH FIEQVAIAVD 480 FRDQPAEQQT MQQNLQKICL KTGTPMEAHA AAILTPYAFC KLQDELVAAA HHTSFQMENG 540 CFLVRHHMKI DGGWKVDWVP PPQEFLSCSC RLFESSGILC RHALRVLSTL NCFEIPGRYL 600 PPRWRRKTNI LSPKVGPGAA PSELLERTQA LQSLVSSLIS EATKSKERLD IACEEVSQLL 660 SRIREYPVSD SGAVNRVC

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MSEADEELLN VYDEHSEQRS LTLDDTSSTE ESPKHLRLSS EAANDRIPYV GQRFATHDAA  60
YEFYSQFAMR CGFSIRRHRT EGKDGVGKGL TRRYFVCHRA GNTPIKVSTE TKPQRNRKSS  120
RCGCQAYMRI SKTTDMGLYE WRVTGFANHH NHELLDPNQV RFLPAYRTMS DSDKNRILMF  180
SKTGISVQQM MRLMELEKCV EPGYLPFTEK DVRNLIQSFR KVEQDDENIN LLRMCRNLKE  240
KDPNFRYEFT TDVNGRLENI SWSYASSVQS YENFGDAVVF DTTHRLNAFD MPLGIWFGMN  300
NYGMPCFFGC VFLREENIRS FSWALKVFLK FMNGKPPQTI LTDQNACLKE AITVEMPTTK  360
HVFCAWLIAA KFPSWFSAVL GERYNDWNAE FYRLYNLEII EDFEHGWKEM VDSFGLHSNR  420
HISNLFAFRD LWASPYLRSH FLAGMTGTGI SKVINSFIQR FLSAQTRLGH FIEQVAIAVD  480
FRDQPAEQQT MQQNLQKICL KTGTPMEAHA AAILTPYAFC KLQDELVAAA HHTSFQMENG  540
CFLVRHHMKI DGGWKVDWVP PPQEFLSCSC RLFESSGILC RHALRVLSTL NCFEIPGRYL  600
PPRWRRKTNI LSPKVGPGAA PSELLERTQA LQSLVSSLIS EATKSKERLD IACEEVSQLL  660
SRIREYPVSD SGAVNRVC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein