PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA57213.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 249aa    MW: 26628 Da    PI: 10.3112
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA57213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.32e-14136180347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r +  +Rt+ q+ s+ qky
       PKA57213.1 136 PWTEEEHRAFLAGLEKLGKGDWRGISRSFVPTRTPTQVASHAQKY 180
                      8****************************99*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MVEKRMGRRC SHCGNNGHNS RTCSNPRAMA GGALKLFGVQ LHIPSSSSIT TTTTTSSSSS  60
SSSSSSLSAM KKSFSMDCLS PSCLTTFPSP SSSSSSLICI DQAAEKISGS GACAGAGYLS  120
DGLMAGRSQA RKKGVPWTEE EHRAFLAGLE KLGKGDWRGI SRSFVPTRTP TQVASHAQKY  180
FLRKNSFSTK KKRRSSLFDA DGGGDSAVNI TGLDLNSPHD LELSLFSSKP LVEAKYSEKF  240
LFFDRIRVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1190194KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.14e-51MYB_related family protein